PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84020.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Nin-like

Protein Properties

Length: 955aa MW: 106165 Da PI: 5.7056

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.1	4.1e-29	604	654	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 e +isle+l++yF++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ OWM84020.1 604 ERSISLEVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKV 654 679**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MENDGDGPFS PTSTFDVPVD FDFMEELFLD GCWVETTDAF DFDVNLPQSG PPSTSNELNN 60 PSNHLPSYQP IFRETEEGPK IEALVHTQTQ EEKSDFPVEG SEGGKRLWIA PKNAETSSSS 120 FLSVHQRLMT AIEYLRVCTK DKDVLIQIWV PVKKEGRQVL TTDEQPFTVG LSSRGLESYR 180 RVSRAYHFPA DGSKEFVGLP GRVFLGKLPE WTPDVRFFRS EEYPRIDHAK LCDVRGSMAV 240 PVFEQGSGTC MGVVEMVTTS SKINYRLDLD IVCKALEAVD LRSSQSFSTP IVEVGSNELC 300 SSDIFLQFFE VLKSICKLYG LPLALTWAPC VKQGKEGCRH SDENYTFCVS TLDPACFVAD 360 SGMVEFLEAC SEHHLLKGEG IVGEAFSSNR PTYTADITAF GKTEYPLSHH ARIFDLHCVV 420 AIPLTSIYSN SPDFVLEFFL PKDCKESEER SQVLNSLLGV IHQAFRNSQF LTGKELEEVV 480 AGLPSDKTSQ KEENNRSPMS PLRERANEDS SWISNMIETQ RKGKGVSLSL NLQREPQEEF 540 QLMTQWENDA HAEIELNHGP VYHGFWQNPD LINSVRGGSD SPSLGGSNSG SSRRAGKKRR 600 TKTERSISLE VLRQYFAGSL KDAAKSLGVC PTTLKRICRQ HGINRWPSRK IKKVGHSLKK 660 LQHVIDSVQG AEGAIQLDSF YASFPELSPN LSGGTGPAIS PNKPSVPINP LLKNPIPTLT 720 SNPQAPLSQE ETRVLSSGAT TTSRSPSSCS QTSTSTASCS TGAKHDPAMM NPSSVDVLTE 780 EIEEVLKRAH SDAELHVSSR EESKPKKLIA RSQSHKLFGE NIPIDETPLP PNLPRGGTNN 840 ILNPPESSLF RVKATYGEEK IRFTLQPSWG FLDLQREIGR RFGIDDFSMI HVKYLDDDRE 900 WVLLTCDADL EECIDVYRAS SQSRMIRISL HQASKLDLNH SLGSSGQSQP HDRFL

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MENDGDGPFS PTSTFDVPVD FDFMEELFLD GCWVETTDAF DFDVNLPQSG PPSTSNELNN  60
PSNHLPSYQP IFRETEEGPK IEALVHTQTQ EEKSDFPVEG SEGGKRLWIA PKNAETSSSS  120
FLSVHQRLMT AIEYLRVCTK DKDVLIQIWV PVKKEGRQVL TTDEQPFTVG LSSRGLESYR  180
RVSRAYHFPA DGSKEFVGLP GRVFLGKLPE WTPDVRFFRS EEYPRIDHAK LCDVRGSMAV  240
PVFEQGSGTC MGVVEMVTTS SKINYRLDLD IVCKALEAVD LRSSQSFSTP IVEVGSNELC  300
SSDIFLQFFE VLKSICKLYG LPLALTWAPC VKQGKEGCRH SDENYTFCVS TLDPACFVAD  360
SGMVEFLEAC SEHHLLKGEG IVGEAFSSNR PTYTADITAF GKTEYPLSHH ARIFDLHCVV  420
AIPLTSIYSN SPDFVLEFFL PKDCKESEER SQVLNSLLGV IHQAFRNSQF LTGKELEEVV  480
AGLPSDKTSQ KEENNRSPMS PLRERANEDS SWISNMIETQ RKGKGVSLSL NLQREPQEEF  540
QLMTQWENDA HAEIELNHGP VYHGFWQNPD LINSVRGGSD SPSLGGSNSG SSRRAGKKRR  600
TKTERSISLE VLRQYFAGSL KDAAKSLGVC PTTLKRICRQ HGINRWPSRK IKKVGHSLKK  660
LQHVIDSVQG AEGAIQLDSF YASFPELSPN LSGGTGPAIS PNKPSVPINP LLKNPIPTLT  720
SNPQAPLSQE ETRVLSSGAT TTSRSPSSCS QTSTSTASCS TGAKHDPAMM NPSSVDVLTE  780
EIEEVLKRAH SDAELHVSSR EESKPKKLIA RSQSHKLFGE NIPIDETPLP PNLPRGGTNN  840
ILNPPESSLF RVKATYGEEK IRFTLQPSWG FLDLQREIGR RFGIDDFSMI HVKYLDDDRE  900
WVLLTCDADL EECIDVYRAS SQSRMIRISL HQASKLDLNH SLGSSGQSQP HDRFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	597	602	KKRRTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein