PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84059.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 222aa    MW: 24745.2 Da    PI: 4.3229
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-172372255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr +k +g+Wv+eIr p++   r r++lg++++a++Aa+a +aa  +l+g
  OWM84059.1 23 KYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDSADQAARAFDAAQVCLRG 72
                7*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MVKRAIGKLL SQSSEERRDT DFKYKGVRKR KWGKWVSEIR LPNSRDRIWL GSYDSADQAA  60
RAFDAAQVCL RGPSARLNFP GSSPAIPSGP LTHEEIQSIA ARFANSGIPA EPPMPEASLG  120
SVSEESSEES RAQSESGQIF PDSPSDSISI GSSQVDSTGR SFMDFLVDLD RGSESYKPLD  180
YGIFPGFDDF TDDYYTQTIP ITEFGEEKFD DFSGQEFFLW DY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.15e-30ERF family protein