PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84100.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 226aa    MW: 25640.5 Da    PI: 10.1501
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3444e-146683399
                -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                s ++ l+ +sg  W  +l  +k sg  +l++GW  Fv+++g++ g f++F++dg  e++l+vkvf+ 
  OWM84100.1  6 SGDVHLKGPSGYCWPARL--TKESGNLYLARGWPAFVRDHGIQRGHFLLFRFDG--ETTLKVKVFSG 68
                44799*************..*******************************877..6678***9985 PP
2B352.77.6e-17130220397
                 EE-..-HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   3 kvltpsdvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 k+l+  +v  +   + lv+  +fa+ h  k++ ++ l+    + ++W v +  +k+s+ry+l++GW +Fvk+ +++egD++ F+l++  +f l+v+v+
  OWM84100.1 130 KKLKAYSVVGRergKTLVIDSTFAKIHFVKPRMPIVLR---WEDKEWPVIV--TKSSERYYLRGGWPKFVKESKVQEGDTCKFELVD--RFVLRVHVL 220
                 55555555444445789*******88877776664444...456*******..*******************************986..676777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MKGKDSGDVH LKGPSGYCWP ARLTKESGNL YLARGWPAFV RDHGIQRGHF LLFRFDGETT  60
LKVKVFSGTA CEDKAAFGAK PSRGNGNDPR KPREELVAKV REEDGSGHRA EKVVLQEPGP  120
STSTFPSFTK KLKAYSVVGR ERGKTLVIDS TFAKIHFVKP RMPIVLRWED KEWPVIVTKS  180
SERYYLRGGW PKFVKESKVQ EGDTCKFELV DRFVLRVHVL KCVEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.11e-12B3 family protein