PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84109.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 261aa MW: 29842.1 Da PI: 7.9149

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.8	6.8e-15	7	54	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed++l+d vk+ G g W+++++ ++R++k+c++rw++yl OWM84109.1 7 RGPWAATEDQILIDFVKKNGEGKWERVSKQTVLRRCGKSCRLRWLNYL 54 89********************************************97 PP
2	Myb_DNA-binding	49.6	9.1e-16	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E++l+++++k+lG++ W++ a++++ gRt++++k++w++ OWM84109.1 60 RGNISEDEEDLIIRLHKLLGNR-WSLMAKRLP-GRTDNEIKNYWNST 104 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MKKELTRGPW AATEDQILID FVKKNGEGKW ERVSKQTVLR RCGKSCRLRW LNYLRPDIKR 60 GNISEDEEDL IIRLHKLLGN RWSLMAKRLP GRTDNEIKNY WNSTLRKKLQ LGGQQPKRPY 120 LKKNIATKDR CNEVAPCMDN IKAPSVDKRM AAAPADDPED STANATTVPK AKLGPLTLTL 180 PVASDEKDGC PWNDFMVDHK PCTEICSSDE FMELCTQIFG ADESETRFDR MCGPSSSNNN 240 LQDRDMSEEM LFKWAAELMD N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-54	MYB family protein