PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84110.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 263aa MW: 29739.6 Da PI: 6.3013

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84110.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.6e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d vk G g+W+++++ g++R++k+c++rw++yl OWM84110.1 16 KGAWTATEDQILIDFVKNNGEGRWERVSKQTGLRRCGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	54.8	2.1e-17	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia++++ gRt++++k++w++ OWM84110.1 69 RGNISEDEEELIIRLHKLLGNR-WSLIAKRLP-GRTDNEIKNYWNSI 113 7899****************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MRRNPSPTRS KEELSKGAWT ATEDQILIDF VKNNGEGRWE RVSKQTGLRR CGKSCRLRWL 60 NYLRPDIKRG NISEDEEELI IRLHKLLGNR WSLIAKRLPG RTDNEIKNYW NSILRKKLQL 120 GGKQSEYRNP KKNIATKDPC NEVSPTMANV QGPPVDHSLT AASLDEPEGS MANATVPEAK 180 GPTTLQVAGD EKDGCPSDFM VNHKLCTEIC PSDDFMELCT QIGPKESENR FDQMSLPSSS 240 NNLQDSELSE EMLFKWAADL MDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	5e-57	MYB family protein