PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84114.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 257aa MW: 28890.9 Da PI: 7.8357

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.6	6.6e-14	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk+ G g W ++ ++ g++R++k+c++rw++yl OWM84114.1 16 KGAWTVIEDYILIDYVKRNGEGKWGRVVKETGLRRCGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	50.2	6e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++ +k++w+++l OWM84114.1 69 RGNISDDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNKIKNYWNTVL 114 7899****************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MGRNPSPTLL KDGLNKGAWT VIEDYILIDY VKRNGEGKWG RVVKETGLRR CGKSCRLRWL 60 NYLRPDIKRG NISDDEEELI IRLHKLLGNR WSLIAGRLPG RTDNKIKNYW NTVLKKKSKL 120 GGEQPKNHKP INDITVKYQC NEVLEAIAHE DHPLDQTTAA SAVLPKASTA NTTILQAEGQ 180 VILPMAVENI NDCCPWDFTA VEHKLGEVFM SEFVDLFTIA ANDLYPQNNG RPGECENVFD 240 VKRSVHSSSD DLVAGPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-56	MYB family protein