PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84116.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 268aa MW: 30549.2 Da PI: 7.1017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47	5.7e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d+v+ +G ++W+ +ar+ g+ R++k+ ++rw++yl OWM84116.1 15 KGAWTALEDKILKDYVTAHGDRRWHIVAREAGLSRSAKSSRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	52.3	1.4e-16	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ OWM84116.1 68 RGNITKDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 112 7999****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MGRGPSNGRG DKLNKGAWTA LEDKILKDYV TAHGDRRWHI VAREAGLSRS AKSSRLRWLN 60 YLRPDIKRGN ITKDEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TNLIKKLEKA 120 SHTNNRRVND QTKTKIETFE TEKPSALLQH DIAKLQFLND DICLDPARSG GRESLLDHNN 180 SGYCCSAATT LVEVSGQLKM DFLVDDVDRS ITNLEYEFSR LRDYDACLTG SASNACSEDF 240 LGQSFQWLPE GFLDNRSWEF ASGEDWVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	6e-53	MYB family protein