PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84176.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 334aa    MW: 38149.2 Da    PI: 6.7968
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.34.5e-51141402128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                 ppGfrFhP+deel+ +yL++kv++++l++ +vi+e+d+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l+  +++ 
  OWM84176.1  14 PPGFRFHPSDEELIIHYLQNKVTSHPLPA-TVIAEIDLYKYNPWELPQKALFGEDEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILAFgGSKS 111
                 9****************************.99***************88888999*************************************9867788 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk+Lvfy+gr pkg+ktdW+m eyrl
  OWM84176.1 112 IGVKKSLVFYTGRPPKGVKTDWTMSEYRL 140
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEKLELPSTR FHFPPGFRFH PSDEELIIHY LQNKVTSHPL PATVIAEIDL YKYNPWELPQ  60
KALFGEDEWY FFSPRDRKYP NGARPNRAAA SGYWKATGTD KPILAFGGSK SIGVKKSLVF  120
YTGRPPKGVK TDWTMSEYRL PDAAIKLPRL KGSMRLDDWV LCRVRRKVNI PKYADDQEKQ  180
SSEPVWYSQS PKVEIARPMS KYSTSMNMDH LYGDCQAIAS LLAGQSLPAM ENIRSISFQG  240
SNNSPGAVPN IYDQVNTLKR TSVEDDVTGD LIQPQKKQKE DITDEDLLLG TLETNQYNER  300
RNQDDLFNLQ VSDCMIDFPE LNDWALKHLL TALP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.18e-74NAC family protein