PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84178.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YC
Protein Properties Length: 222aa    MW: 25139.4 Da    PI: 10.3201
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC30.48.1e-101101951094
       NF-YC  10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkr.rtlkksdiaaavtrtdifdflvd 94 
                  e +++ k + +P+ r+++i+k+     +i  ea  l+ ka e fi ++   ++  a   +r r lk s +++ v++   +dfl  
  OWM84178.1 110 EEVDEEAKLNVIPMNRVQRIVKSGGPDLKINQEAYFLINKATEKFIGQFCEDAFTSAAARDRkRYLKYSHLSSLVAKERRYDFLSA 195
                 445566778899***********988889*************************99887776257999***************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MKKATNGKTK DKSKDNMGTA KTSNHHRPRE TQDQKSKNKK KKKNKQSIIP NGTVNKPEVL  60
IVPSSSSESH GGGEKPKKSV VSKRQRTSNG NPSSCSKKQR RRKEEEEQEE EVDEEAKLNV  120
IPMNRVQRIV KSGGPDLKIN QEAYFLINKA TEKFIGQFCE DAFTSAAARD RKRYLKYSHL  180
SSLVAKERRY DFLSAALVDA ADFVPEKMKA EDALKEIEQE ET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.14e-26NF-YC family protein