PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84464.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 437aa MW: 48461.1 Da PI: 6.8717

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.7	4.6e-36	51	193	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgyW 83 lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ + +W OWM84464.1 51 LPAGVKFDPTDQELI-EHLEAKVEAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETRW 147 799**********.99*****5553344444434666646******.555666799***************73334555544778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l OWM84464.1 148 HKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 193 *********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MNNSKGSNLS SNVASSSDLI DAKLEEHQVC GSKLCPSCGH KLEGKPDWLG LPAGVKFDPT 60 DQELIEHLEA KVEAKDMKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP 120 SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK 180 PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SDRSGSASTV GEVSGASDHN 240 FGRRGSSSSS VTNHMSCSAS NKEVIPQQDE ISAAVASAAN ISGFSSATMD IQQLKTEHFG 300 FVPFRKTFDE VGIGEVSTVR EAPSSVGTCE SDPYQRTSHP MAPQQQPLPL PPHPHIAAAT 360 ATAAFHISRP SNPISAIMAP PPLHHTSIIL DEHDSYHVSR MMLQNEFQES SMPNPQEPEW 420 LKYSSFWPDP DNPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MNNSKGSNLS SNVASSSDLI DAKLEEHQVC GSKLCPSCGH KLEGKPDWLG LPAGVKFDPT  60
DQELIEHLEA KVEAKDMKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP  120
SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK  180
PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SDRSGSASTV GEVSGASDHN  240
FGRRGSSSSS VTNHMSCSAS NKEVIPQQDE ISAAVASAAN ISGFSSATMD IQQLKTEHFG  300
FVPFRKTFDE VGIGEVSTVR EAPSSVGTCE SDPYQRTSHP MAPQQQPLPL PPHPHIAAAT  360
ATAAFHISRP SNPISAIMAP PPLHHTSIIL DEHDSYHVSR MMLQNEFQES SMPNPQEPEW  420
LKYSSFWPDP DNPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-160	NAC family protein