PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84672.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family TCP
Protein Properties Length: 330aa    MW: 36380.7 Da    PI: 10.7757
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP133.61.8e-41712113130
         TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaesssssasnsssg......... 88 
                 +kkdrhski T++g+RdRRvRls+ +a+rfFdLqd+LGfd++skt+eWLl ++  +ik+l++t+ +++s+     ++ sssss+s    g         
  OWM84672.1  71 AKKDRHSKILTAQGLRDRRVRLSIGIARRFFDLQDMLGFDRASKTLEWLLSKSTDSIKKLARTKHINNSNQqdktSPTSSSSSGS----Ggsscsgfey 165
                 79*************************************************************6666655422223333333333....2455689999 PP

         TCP  89 ......kaaksaakskksqksaasalnlakesrakarararertrekm 130
                        + k+aaks +s+k+++ +ln++ +sra+ rararert+ek 
  OWM84672.1 166 evmpkkGKVKKAAKSISSKKRTK-TLNVD-QSRAEPRARARERTQEKF 211
                 99997433333334444444444.56665.5***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MNSSSSSVYH HHNQYPPPSF LNHEGQLSDL LLVPPPVSSV VSSQHQALLG TVLSRNGEPS  60
SLRNNVSLPE AKKDRHSKIL TAQGLRDRRV RLSIGIARRF FDLQDMLGFD RASKTLEWLL  120
SKSTDSIKKL ARTKHINNSN QQDKTSPTSS SSSGSGGSSC SGFEYEVMPK KGKVKKAAKS  180
ISSKKRTKTL NVDQSRAEPR ARARERTQEK FISNCQFRAS SAQSDGSAQN PLDSQSPNTI  240
PASKNQALPL ELEVAKQSVA TMRKPSTSVL FNHHKNSSVI SSSKDWNSNF SVVQGFLPDL  300
SPQWEVNHAI NVNLTTEFRS STEELRSKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.22e-30TCP family protein