PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84706.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 154aa    MW: 17055.4 Da    PI: 9.1856
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021103124323
                 ETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                 Cp C+++F++k    +H  + H
  OWM84706.1 103 CPECSRRFRNKAAVDQHVYNrH 124
                 *****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MRVLFCSVLL CSAYKRPCLP SLIPNSKSPD ILPSSFLVVF LRLHSAPLMA CIGGNSGGDG  60
SGDGGYPGDD FNGFCNNCGR VFLNGRAVAN HQKAIHKNCN SICPECSRRF RNKAAVDQHV  120
YNRHDSGKKK KETEEEDHGK EETKKDKKKK KEEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128150KKKKETEEEDHGKEETKKDKKKK
2128154KKKKETEEEDHGKEETKKDKKKKKEEK
3129151KKKKETEEEDHGKEETKKDKKKK