PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84829.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 379aa MW: 43092.1 Da PI: 7.4297

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160	9.3e-50	17	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++++ + OWM84829.1 17 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGENSRPI 114 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +t+W+m+eyrl OWM84829.1 115 GLKKTLVFYSGKAPKGIRTSWIMNEYRL 142 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MSQEDNGRDE HEHDMVMPGF RFHPTEEELV EFYLRRKVEG KRFNVELITF LDLYRYDPWE 60 LPALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT GADRMIRGEN SRPIGLKKTL 120 VFYSGKAPKG IRTSWIMNEY RLPQHETERS QKVEISLCRV YKRPGVEDHP SLPRSSSLGT 180 KPSSSSRLAC TLSSANKKHY NIEIMERQLQ AHNNASQINN ENNNSSIEKM TETDGSCSSS 240 DVSIALGLSR HDTAAYCPLV EVNNGISLLQ PQPPKTNLPS ASSSSSGCSL VPFTVDELHT 300 IVNYQHQQQP EQLVHHQFYG HQSAESTQLL ISPNQLSSSK IPIGTLQAAA TNFSDRLWDW 360 NPVPETNRPL PDQFGSHFK

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MSQEDNGRDE HEHDMVMPGF RFHPTEEELV EFYLRRKVEG KRFNVELITF LDLYRYDPWE  60
LPALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT GADRMIRGEN SRPIGLKKTL  120
VFYSGKAPKG IRTSWIMNEY RLPQHETERS QKVEISLCRV YKRPGVEDHP SLPRSSSLGT  180
KPSSSSRLAC TLSSANKKHY NIEIMERQLQ AHNNASQINN ENNNSSIEKM TETDGSCSSS  240
DVSIALGLSR HDTAAYCPLV EVNNGISLLQ PQPPKTNLPS ASSSSSGCSL VPFTVDELHT  300
IVNYQHQQQP EQLVHHQFYG HQSAESTQLL ISPNQLSSSK IPIGTLQAAA TNFSDRLWDW  360
NPVPETNRPL PDQFGSHFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-111	NAC family protein