PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84886.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 240aa    MW: 26262 Da    PI: 5.0564
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19119170256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+++AeIrdp+ ng  +r++lg++ t+e+Aa a+++a+ +++g+
  OWM84886.1 119 HYRGVRRRP-WGKYAAEIRDPKRNG--ARIWLGTYETPEDAAVAYDRAAFQMRGA 170
                 7********.**********98776..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MAGGGVGASE MESSHCLLVE SIRQHLQEDN VGNGSGFFRR SPSFSSILLA ESWSELPLKV  60
DDSEDMVVYG ALCDALSSGW DPAPGGMELR EAAPEVERND AAEEAVSQSQ SAAVEPERHY  120
RGVRRRPWGK YAAEIRDPKR NGARIWLGTY ETPEDAAVAY DRAAFQMRGA KAKLNFPHLI  180
GSVNYEPVRV SPKRRSPEPS SPSSSSSGAS PKQKQRKTGS QFEYGSELEM GFSPDEQFFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-54ERF family protein