PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85065.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 297aa MW: 32445.7 Da PI: 4.4202

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.8	2e-37	35	93	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e++ +cprC s ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk+++s OWM85065.1 35 EESPSCPRCASPNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRS 93 56679***************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MDPFSVPLQS IGNQMLSCQF AGIDRRWKLG GSGNEESPSC PRCASPNTKF CYYNNYSLTQ 60 PRYFCKSCRR YWTKGGSLRN VPVGGGCRKS RRSRAARAAR ANPFPAAHPN SNNRSAASTS 120 SDDVDHDEQD RVHDIDMAAV FAKFLNQDSS PNSEIDQLNC ADQESPSDEV DPSFALPINV 180 IDPLMFLSQD TAGQGKQQIQ GDGEVQEFMA GNDLDLLGLT PSMLAEGDLD GSMLAAGGGL 240 WIDPESLSFP NSTWQHETLS SSSADHDWKI GSSSTNLMMM TGDNWNSTFD FPGFEVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	2e-35	Dof family protein