PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85141.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 576aa MW: 64444.7 Da PI: 4.5881

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.3	6.2e-53	17	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrFhPtdeel+ +yLk+k+ +kkl+l ++i+e+d+yk++P++Lp + +k+++++wyfFs rd+ky++g r+nrat++gyWkatgkd++++s +++ OWM85141.1 17 PPGFRFHPTDEELILYYLKRKICRKKLRL-NIIAELDVYKWDPEELPgHsILKTGDRQWYFFSARDRKYPNGARSNRATRHGYWKATGKDRNITS-NSR 113 8*************************9.89***********6347788999**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+g+ap+g++++Wvmhey+l OWM85141.1 114 SVGVKKTLVFYQGKAPSGQRSNWVMHEYTL 143 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MTVGSDSSPA VRGSAWPPGF RFHPTDEELI LYYLKRKICR KKLRLNIIAE LDVYKWDPEE 60 LPGHSILKTG DRQWYFFSAR DRKYPNGARS NRATRHGYWK ATGKDRNITS NSRSVGVKKT 120 LVFYQGKAPS GQRSNWVMHE YTLDEEELKR CKNAKDYYAL YKVYKKSGAG PKNGEQYGAP 180 FREEEWADDD SEVVKTVGEE ILPTQLPEVT SVDNVTDVTR LDPPAVDDIE ELLKQYMPEL 240 DDPAAVDSLA PVPVFPQFGN EEEAQSSLFI PPTSEFSVEP VYAFNSNQPL HDLQPSFEFN 300 SLGVSQYQQQ EASSVVTFAP ENYPLQPQIR EEDFLEIDDL IGGPEPSFGN IEKPVEKSPF 360 EEVDGLSELD VFHDAAMFLR DIGPMDQENV AAPDMNLFNY GVVDDGNYQY QVQQNPLLMA 420 QQSANQLWVH DQRGNAFTSW ESTQGVQPPP SGFVSDSGND NVSNANQNQN GGEEVSGRMS 480 RFSSAVWSFV ESIPTNPASA SENALVSRAF ERMSSFSRVR INSVATNVGS VTGAAAVVRR 540 SGKSRRFVLF YVIGVLGALF GVLIGTLRLW ERCVSP

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MTVGSDSSPA VRGSAWPPGF RFHPTDEELI LYYLKRKICR KKLRLNIIAE LDVYKWDPEE  60
LPGHSILKTG DRQWYFFSAR DRKYPNGARS NRATRHGYWK ATGKDRNITS NSRSVGVKKT  120
LVFYQGKAPS GQRSNWVMHE YTLDEEELKR CKNAKDYYAL YKVYKKSGAG PKNGEQYGAP  180
FREEEWADDD SEVVKTVGEE ILPTQLPEVT SVDNVTDVTR LDPPAVDDIE ELLKQYMPEL  240
DDPAAVDSLA PVPVFPQFGN EEEAQSSLFI PPTSEFSVEP VYAFNSNQPL HDLQPSFEFN  300
SLGVSQYQQQ EASSVVTFAP ENYPLQPQIR EEDFLEIDDL IGGPEPSFGN IEKPVEKSPF  360
EEVDGLSELD VFHDAAMFLR DIGPMDQENV AAPDMNLFNY GVVDDGNYQY QVQQNPLLMA  420
QQSANQLWVH DQRGNAFTSW ESTQGVQPPP SGFVSDSGND NVSNANQNQN GGEEVSGRMS  480
RFSSAVWSFV ESIPTNPASA SENALVSRAF ERMSSFSRVR INSVATNVGS VTGAAAVVRR  540
SGKSRRFVLF YVIGVLGALF GVLIGTLRLW ERCVSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-128	NAC family protein