PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85153.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 428aa MW: 47825.1 Da PI: 6.4593

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	94.9	5.4e-30	129	234	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 f+kv tpsdv+k++rlv+pk++ae++ + +++++ l++ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + +l OWM85153.1 129 FDKVVTPSDVGKLNRLVIPKQHAERFfpldsSTSEKGGLLLSFEDRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGDaGKDRL 227 89*************************9966667889***********************************************65588788888 PP EEEEE-S CS B3 93 vvkvfrk 99 ++ ++ k OWM85153.1 228 FIDWRHK 234 8888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MDLNPRRDVP TFVEQEEEAI RGEHQFHPFP SSTCATTTTS SSSPLQYNRG FIALSNHHHR 60 PQMGTWLGGC KSFKPEDDSP VRSGEGSPKN LEFTDLSMNL ECREEEEGEE GEDSKANREA 120 AVVEKEHMFD KVVTPSDVGK LNRLVIPKQH AERFFPLDSS TSEKGGLLLS FEDRAGKPWR 180 FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGVG DAGKDRLFID WRHKPNARRD 240 MPMSINYPGN VSFPHSFSFH RPVPTGMWNT NCPSNFPRDH HNMGLTTIND VSLNPYRTNM 300 YGNVMNPAYG DGSVLYLRSS AAAPLGGGLF GGGIEQPVPV VFESVPVVQG TKAVAPPTNN 360 RRQLRLFGVN MDYPTSESDE HDEAPHTDLS SSQSIHEYQQ LSVYDGKPVP SGWLNKGKAS 420 TSSLDFGI

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MDLNPRRDVP TFVEQEEEAI RGEHQFHPFP SSTCATTTTS SSSPLQYNRG FIALSNHHHR  60
PQMGTWLGGC KSFKPEDDSP VRSGEGSPKN LEFTDLSMNL ECREEEEGEE GEDSKANREA  120
AVVEKEHMFD KVVTPSDVGK LNRLVIPKQH AERFFPLDSS TSEKGGLLLS FEDRAGKPWR  180
FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGVG DAGKDRLFID WRHKPNARRD  240
MPMSINYPGN VSFPHSFSFH RPVPTGMWNT NCPSNFPRDH HNMGLTTIND VSLNPYRTNM  300
YGNVMNPAYG DGSVLYLRSS AAAPLGGGLF GGGIEQPVPV VFESVPVVQG TKAVAPPTNN  360
RRQLRLFGVN MDYPTSESDE HDEAPHTDLS SSQSIHEYQQ LSVYDGKPVP SGWLNKGKAS  420
TSSLDFGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	6e-65	B3 family protein