PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85171.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 414aa MW: 46586.8 Da PI: 6.447

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162	2.3e-50	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+evd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + OWM85171.1 11 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIREVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS-G 107 69**************************.9***********964443122456**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +gl+ktLvfykgrap+g k+dW+mheyrl OWM85171.1 108 CRRIGLRKTLVFYKGRAPHGLKSDWIMHEYRL 139 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MNLSINGQSQ VPPGFRFHPT EEELLHYYLR KKVAYEKIDL DVIREVDLNK LEPWDIQEKC 60 RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKIIYSGCRR IGLRKTLVFY 120 KGRAPHGLKS DWIMHEYRLD DNNQEPNGLA SPVDVNMPEE GWVVCRVFKK KNYQKALDSP 180 RSASTAASMD SKIQMLCSAG NQAGVLDQIL SYMGRTSCKV ENETSLNPKH PERNYNNIVD 240 NGNSNGNNNN NNKQYQFPPG DALHQERFMH LPGLDSPTMP PPPPISSSSS HFDQYQPFEE 300 LMLPEAEPAA SSDAATPDNS EPLPGPVGLS DWAALDRLVA SQLNGHDEQT EPARQFCCFG 360 DDLHELHQVR LNRGNNNNQG LQMFGCESDF FWSGFTGKSS SSSSSSDPLR HLSV

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MNLSINGQSQ VPPGFRFHPT EEELLHYYLR KKVAYEKIDL DVIREVDLNK LEPWDIQEKC  60
RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKIIYSGCRR IGLRKTLVFY  120
KGRAPHGLKS DWIMHEYRLD DNNQEPNGLA SPVDVNMPEE GWVVCRVFKK KNYQKALDSP  180
RSASTAASMD SKIQMLCSAG NQAGVLDQIL SYMGRTSCKV ENETSLNPKH PERNYNNIVD  240
NGNSNGNNNN NNKQYQFPPG DALHQERFMH LPGLDSPTMP PPPPISSSSS HFDQYQPFEE  300
LMLPEAEPAA SSDAATPDNS EPLPGPVGLS DWAALDRLVA SQLNGHDEQT EPARQFCCFG  360
DDLHELHQVR LNRGNNNNQG LQMFGCESDF FWSGFTGKSS SSSSSSDPLR HLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	2e-98	NAC family protein