PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85177.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HD-ZIP
Protein Properties Length: 227aa    MW: 26308.4 Da    PI: 9.0725
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.97e-183993256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++++f ++q++ Le  Fe+++ p+   + +LA++l+L+ rqV +WFqN+Ra+ k
  OWM85177.1 39 KTKRRFREDQVKSLEGTFESESRPDSCLKHQLADRLELEPRQVAIWFQNKRARLK 93
                67889************************************************98 PP
2HD-ZIP_I/II97.51.3e-3140131293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                   krr+ ++qvk+LE +Fe+e++ ++  K++la +L+l+prqva+WFqn+RAR k+kq+E +y++Lk++yd l+++ e+L++e+e L  +l++
   OWM85177.1  40 TKRRFREDQVKSLEGTFESESRPDSCLKHQLADRLELEPRQVAIWFQNKRARLKNKQIEWEYSRLKTKYDDLTSSFESLKREHELLLVQLQK 131
                  69**********************************************************************************99999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MLPRKHQAFT ATSLNIKTTS SSSSNLLMHQ VQNKRNTDKT KRRFREDQVK SLEGTFESES  60
RPDSCLKHQL ADRLELEPRQ VAIWFQNKRA RLKNKQIEWE YSRLKTKYDD LTSSFESLKR  120
EHELLLVQLQ KLKSNHRKAK GSAHTQAEDH AKESQTKPGY VAGCRHNART VQSGDDCGIA  180
ETVPEKFTLE PVEEMGQDSF PSSGSWYDPG YFLDESSYGP KWWELWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.11e-29HD-ZIP family protein