PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85352.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 166aa MW: 18576.6 Da PI: 5.0952

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	159	7.6e-50	3	95	2	94
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 eq+r+lPian++rimk++lPa akisk+ak+tvqec++efisfvt+eas+kcq+e+rkt+ngdd++wal+tlGf+dy+ ++ yl++yre OWM85352.1 3 DEQERMLPIANIGRIMKQMLPASAKISKEAKQTVQECATEFISFVTGEASEKCQKENRKTVNGDDICWALSTLGFDDYARAMMRYLQRYREQA 95 59****************************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MADEQERMLP IANIGRIMKQ MLPASAKISK EAKQTVQECA TEFISFVTGE ASEKCQKENR 60 KTVNGDDICW ALSTLGFDDY ARAMMRYLQR YREQADKDRS SSSSSVAANR PQTGNDGQIT 120 IRRSSEELFL GSNGKTSSNS SHQQEEETDR NAPPTLEFGI INEKNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	2e-51	NF-YB family protein