PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85353.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 1117aa MW: 123668 Da PI: 9.5727

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.9	1.3e-09	46	82	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W+ eE e++++a +++G++ W+++a+ + +R+ +++ OWM85353.1 46 QWSHEELERFYEAYRKHGKD-WRRVAAVLR-NRSVEMVE 82 6***************99.*****.*98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1117 aa Download sequence
MAPSRKSRSA YKRFSNLNEV SPDKDAGSSK SGRPRKKKLS DMLGPQWSHE ELERFYEAYR 60 KHGKDWRRVA AVLRNRSVEM VEALYNMNRA YLSLPEGMAS VVGLKAMMTD HYNVLEGTES 120 DRESTDAAEV RKPQKRKRAK VQVTAPREDL LHFSNDLSND GCLSLLKRRR TDGGQPRAVG 180 KRTPRFPVSS LYRRDGRENF VSMNKRVGKS ESDANDDDVA HEAALALAVA SNRGGAIKCG 240 DASLDEELIE GSIGSAGTEN GDARDMRSLK DIEGVGTVEV HKKGKKIYRK KEKVEKQEKE 300 FEDGGEACSG TEEGDNANVS KRKVDIGALN VKKDKSTRQG QRKRSKKLFF GDENAALSAL 360 QTLADLSLMM PASAMDSESS IQLKEEKSSF NIDDKTGVPE ATSTTHQRGS PSGSKDKIFH 420 ATSGSEAKKS KPGRRSNPDA FSQVNEKLKP TNKTVRRKSK PVVSKLPNDE VHSSPHLDEN 480 VKSEAAGEEG NKSVIKGKRS IQVSSIARNL KTLKLSESYS DADKKGRETG SVVSTAQVPA 540 PAQFDLAARH RSRRKKNLPK IWSSEETSGP DTMSRKLLDT QATFVQDKLS CWLSSALARR 600 WCIFEWFYSA IDYPWFAKRE FVEYLNHVGL GHIPRLTRVE WSVIRSSLGK PRRFSENFLS 660 EERKKLEQYR ESVRKHYAEL RTGARDGLPA DLARPLSVGQ RVIALHPKTR ELHDGSVLTV 720 DHDKCRIQFD RPDIGVEFVM DVDCMPVSPV DNMPEALRRH NVFAEKFSTV SKEPQMNGNI 780 NFGGSLVYGV SGHTAQSPMN SLMKQGKDIT RAISQAKGAA ISGIGAQHLV YSQSLPTAHI 840 QAREADIQAL SNLTRALDKQ EALLMELRNL NNDVLQHQND GDGSLKDSDS FKKHYATASS 900 ALVHLRERNT YTGNPLPPWL KTQVNSGTPI GLSGSVDKYL LSQESGCNVP EIVDGSRLKA 960 QAMVDTAIKA ISSAKEGEEA FMRIAEAFDS INDQHLTSDP RLLAAMSPEK ANGAFHQSSQ 1020 SNDSMADPNH SLGRPSGDYD KETQIPAELI TSCVATLLMI QTCTERHYPP ADVARILDSA 1080 VSSLHPCCPE NLPIYREIQM SMGRLKTQIL ALVPTQI

Sequence ? help Back to Top

Protein Sequence Length: 1117 aa Download sequence

MAPSRKSRSA YKRFSNLNEV SPDKDAGSSK SGRPRKKKLS DMLGPQWSHE ELERFYEAYR  60
KHGKDWRRVA AVLRNRSVEM VEALYNMNRA YLSLPEGMAS VVGLKAMMTD HYNVLEGTES  120
DRESTDAAEV RKPQKRKRAK VQVTAPREDL LHFSNDLSND GCLSLLKRRR TDGGQPRAVG  180
KRTPRFPVSS LYRRDGRENF VSMNKRVGKS ESDANDDDVA HEAALALAVA SNRGGAIKCG  240
DASLDEELIE GSIGSAGTEN GDARDMRSLK DIEGVGTVEV HKKGKKIYRK KEKVEKQEKE  300
FEDGGEACSG TEEGDNANVS KRKVDIGALN VKKDKSTRQG QRKRSKKLFF GDENAALSAL  360
QTLADLSLMM PASAMDSESS IQLKEEKSSF NIDDKTGVPE ATSTTHQRGS PSGSKDKIFH  420
ATSGSEAKKS KPGRRSNPDA FSQVNEKLKP TNKTVRRKSK PVVSKLPNDE VHSSPHLDEN  480
VKSEAAGEEG NKSVIKGKRS IQVSSIARNL KTLKLSESYS DADKKGRETG SVVSTAQVPA  540
PAQFDLAARH RSRRKKNLPK IWSSEETSGP DTMSRKLLDT QATFVQDKLS CWLSSALARR  600
WCIFEWFYSA IDYPWFAKRE FVEYLNHVGL GHIPRLTRVE WSVIRSSLGK PRRFSENFLS  660
EERKKLEQYR ESVRKHYAEL RTGARDGLPA DLARPLSVGQ RVIALHPKTR ELHDGSVLTV  720
DHDKCRIQFD RPDIGVEFVM DVDCMPVSPV DNMPEALRRH NVFAEKFSTV SKEPQMNGNI  780
NFGGSLVYGV SGHTAQSPMN SLMKQGKDIT RAISQAKGAA ISGIGAQHLV YSQSLPTAHI  840
QAREADIQAL SNLTRALDKQ EALLMELRNL NNDVLQHQND GDGSLKDSDS FKKHYATASS  900
ALVHLRERNT YTGNPLPPWL KTQVNSGTPI GLSGSVDKYL LSQESGCNVP EIVDGSRLKA  960
QAMVDTAIKA ISSAKEGEEA FMRIAEAFDS INDQHLTSDP RLLAAMSPEK ANGAFHQSSQ  1020
SNDSMADPNH SLGRPSGDYD KETQIPAELI TSCVATLLMI QTCTERHYPP ADVARILDSA  1080
VSSLHPCCPE NLPIYREIQM SMGRLKTQIL ALVPTQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein