PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85421.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Dof
Protein Properties Length: 364aa    MW: 39033.2 Da    PI: 8.3905
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85421.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.4e-3945104362
      zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +al+cprCdstntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk +
  OWM85421.1  45 AAALRCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLK 104
                 56899****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MATLEDAKKD CALDPQNLAP RKHAAAAAPS SRPAGDAPPP PDQQAAALRC PRCDSTNTKF  60
CYYNNYSLSQ PRHFCKTCRR YWTKGGALRN VPIGGGCRKN KKLKSSSSAS RLSSAFDSKL  120
DSSSSGAGAA SPSSSADVPG FRFFPNPASL SPAVDFQLSG LSSSFNRLPM PLSSFADIPN  180
SNSRFSLEQP IGFNNCYPSL SSSNTSSPSI ASGLLFGSST NQDMAGSMNI QSSLASSIES  240
LSSLNQDLHW KLQQQRLAML FGPVESNTQK DAATFVSPAP ATHSLETQVV HKPQPVPFQN  300
QEFVPIKSDN IYSRKEGETT VTEWFFGNSY NSLIPDSAEE SGNGDRSVQA WGNSNLHQFG  360
ANLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.13e-45Dof family protein