PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85486.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 135aa    MW: 14656.4 Da    PI: 7.5009
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.4e-1190117330
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                 r+h+e+E+rRR+riNs +++Lr+llP +
  OWM85486.1  90 RNHKEAEKRRRARINSHLDKLRSLLPCN 117
                 58************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MMPENSSESS NLYQLLAGAG LIDAAGPCGF PGASGAGSMQ AAAAAMALQQ SFCSSSSNNY  60
YNPLFDVSSS GGFSENNTNS PEDRTLAALR NHKEAEKRRR ARINSHLDKL RSLLPCNSKV  120
HIDMNVHIYI YMYIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-15bHLH family protein