PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85581.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 271aa MW: 30882.2 Da PI: 5.9795

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85581.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	199	233	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ OWM85581.1 199 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 233 569*****************************885 PP
2	ELK	39.4	1.3e-13	153	174	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KYsgyLgsLkqEF+ OWM85581.1 153 ELKSRLLQKYSGYLGSLKQEFM 174 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MAHPHYPRLL AAYVNCQKVG APPEVVARLE EACSAAAAMG GGAGSGCIGE DPALDQFMEA 60 YCEMLTKYEQ ELSKPFKEAM LFLQRIESQF RALTLASSEP DISKLLSPSM EQAQILFLSS 120 FAIFSDGMDR NGSSEEEVDV NNSFIDPQAE DRELKSRLLQ KYSGYLGSLK QEFMKKRKKG 180 KLPKEARQQL LDWWTRHYKW PYPSESQKLA LAESTGLDQK QINNWFINQR KRHWKPSEDM 240 QFVVMDATHP HYYMDNVLGN PFPMDISPSI L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	178	LKQEFMKKRK
2	175	179	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-128	TALE family protein