PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85650.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YB
Protein Properties Length: 155aa    MW: 16551.8 Da    PI: 7.7045
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB150.82.7e-471811797
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                mkk+lPanakisk+aketvqecvsefisf+t+easdkcq+ekrktingddllwa++tlGfe+yveplkvyl+k+relegek
  OWM85650.1  1 MKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKFRELEGEK 81
                9******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MKKALPANAK ISKEAKETVQ ECVSEFISFI TGEASDKCQK EKRKTINGDD LLWAMTTLGF  60
EEYVEPLKVY LQKFRELEGE KTAASGLGKP QGDRESDGSV INTVSSGVSF GTPPGMYGAM  120
PPGGMMMMGP GGGHHHHHHH MYGSGGGGSP GGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-56NF-YB family protein