PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85676.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 309aa MW: 33727.6 Da PI: 6.5192

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108	5.2e-34	49	103	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl OWM85676.1 49 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103 79****************************************************8 PP
2	Myb_DNA-binding	63.6	3.9e-20	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ OWM85676.1 51 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 102 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MYQPKSGPSS SLVRSNSLVH GQHLEGGPST MEPVNGGNNA NNNSNLASKQ RLRWTHELHE 60 RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDADKKESA 120 DLLSNMDGSS GMQITEALKL QMEVQKRLHE QLEVQRQLQL RIEAQGKYLK KIIEEQQRIS 180 GVLVDAPGSG LLEPESGDKD QESENKTDPA TPVPTSESLD KASKERALAK SLSMDESFSS 240 HQEPLTPDSG CPLGSPAESP HGEMSKKKQR VGENASSSAK SDIVLPHQIL ESSLSSSYQQ 300 PALNFLTQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-92	G2-like family protein