PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85799.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 192aa MW: 20350.6 Da PI: 6.0225

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	186.6	1.8e-58	30	125	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfedyveplkvyl+++relegek OWM85799.1 30 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLHRFRELEGEK 125 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MVDTDSESPP QGSRGGGENS GGAGDLSSPR EQDRFLPIAN VSRIMKKALP ANAKISKDAK 60 ETVQECVSEF ISFVTGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP LKVYLHRFRE 120 LEGEKTGRDR DGGGGGGDGE SVGGVAGSGT GGYGMVMMMG QAQQHQGHVY GSGVFHHQMG 180 LGGPGSALTR PR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47640.1	3e-64	NF-YB family protein