PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86072.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 133aa    MW: 15227.5 Da    PI: 3.8028
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.65.1e-063154123
                EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                y+Cp+C++ F + ++ + Hir  H
  OWM86072.1 31 YPCPYCSEDFDDAELVEYHIREaH 54
                99*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MDFRRLAWTD ITFEEVEEEE IEEMEDDGAV YPCPYCSEDF DDAELVEYHI REAHPSKSDY  60
DSEVPPANEV ETVQSNLSTS VVSSLEKFPN EEGVERSVHP SPTLEEKAAD KEARSRCEFA  120
QALTLSSFFD MDF