PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86077.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 95aa    MW: 10443.9 Da    PI: 10.1777
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.45.3e-20942134
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                C+ C+ttkTp+WR gp g+++LCnaCG++yrk++
  OWM86077.1  9 CVECHTTKTPMWRGGPAGPRSLCNACGIKYRKRN 42
                ********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MKNTQVPECV ECHTTKTPMW RGGPAGPRSL CNACGIKYRK RNRGLLGSEN RVSKKTSEDS  60
NSSSSNSRGK QRWKLREEEE AAILLMALSC GSVSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.18e-17GATA family protein