PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86081.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 214aa    MW: 23748 Da    PI: 10.7224
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000136587123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C ++F ++  L  H++ H
  OWM86081.1 65 FECHFCRRVFANSQALGGHQNAH 87
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MAEASADKLA KLASQGQFSS MEPSPHSPSS PVKLFGFRIA EPERIPERQE VVQSTQDDHL  60
ISKKFECHFC RRVFANSQAL GGHQNAHKRE RQRAKWAYHH HGDHRPRCIL AGTPVIMPHG  120
VRSAPPNYLF RGALISGNGA VARFEFPTRD HSRSSRPFLL SPFPPSHTHV FDVPRRVGLS  180
PVAGAMVSPL HSTMSRKSPE MDAGVDLHLK LSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.11e-14C2H2 family protein