PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86290.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 391aa MW: 44195.3 Da PI: 4.622

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.8	4.9e-35	15	106	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k ye+++de+++++isw +g+sfv++d ++f+ ++LpkyFkhsnf+SF+RQLn+YgF+kv++++ weF+++ F +gk++ll++i OWM86290.1 15 FLEKSYEMVDDENTDSIISWGGSGDSFVIWDVTQFSVQLLPKYFKHSNFSSFMRQLNIYGFRKVETDR---------WEFANDGFIRGKRHLLKNIS 102 9***************************************************************99.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ OWM86290.1 103 RRKH 106 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MVKPQEEDGP SAAPFLEKSY EMVDDENTDS IISWGGSGDS FVIWDVTQFS VQLLPKYFKH 60 SNFSSFMRQL NIYGFRKVET DRWEFANDGF IRGKRHLLKN ISRRKHPHSN EPKKSSHPQQ 120 SDNSVRSVNG VDSSRLLKDV ENLKNDRNVL MQEFVKLRQL QETSENKLLV LRERVQGMEK 180 NQQQMLSFLV MAMQNPGFLV QLFHPKENYF PMLEQGGVIN GGKQPQLFSD GRLLSYESVL 240 NGLPNPEFSS CSGSRKASGP NSDQTFDGTK DAFLGIDLMK MLMDETSKFT LDGFIIPDFP 300 DDGSWRELLL ASPFITEETE RGKKGPTGPT ICDTNMTESH SFEQLMEQIG RSQGLDGNEA 360 EFDGADSEDN ETMDSLTEQM EHLDSGTNGP S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MVKPQEEDGP SAAPFLEKSY EMVDDENTDS IISWGGSGDS FVIWDVTQFS VQLLPKYFKH  60
SNFSSFMRQL NIYGFRKVET DRWEFANDGF IRGKRHLLKN ISRRKHPHSN EPKKSSHPQQ  120
SDNSVRSVNG VDSSRLLKDV ENLKNDRNVL MQEFVKLRQL QETSENKLLV LRERVQGMEK  180
NQQQMLSFLV MAMQNPGFLV QLFHPKENYF PMLEQGGVIN GGKQPQLFSD GRLLSYESVL  240
NGLPNPEFSS CSGSRKASGP NSDQTFDGTK DAFLGIDLMK MLMDETSKFT LDGFIIPDFP  300
DDGSWRELLL ASPFITEETE RGKKGPTGPT ICDTNMTESH SFEQLMEQIG RSQGLDGNEA  360
EFDGADSEDN ETMDSLTEQM EHLDSGTNGP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-80	HSF family protein