PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86376.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Trihelix
Protein Properties Length: 369aa    MW: 41574.8 Da    PI: 9.2576
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.63.8e-1918107186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W ++e+ aLi a+r+++ +l+r+ l+ p+W++v++++     + +  +s++qC++k+e+l++ry+++k++  + + ++ s++ +f+ ++
  OWM86376.1  18 CWNHEETVALIHAYRDKWFSLGRRTLRSPDWDDVASVValhcPSSPSPKSSVQCRHKIEKLRRRYRAEKQRCASYSGRVFSSWDLFHLID 107
                 7************************************99999999******************************99999******9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MSSPPPPQQP PRSFPAPCWN HEETVALIHA YRDKWFSLGR RTLRSPDWDD VASVVALHCP  60
SSPSPKSSVQ CRHKIEKLRR RYRAEKQRCA SYSGRVFSSW DLFHLIDSIE AGSEPEILVP  120
KTRGKKNLRD GDDDFDPSYD FGSSFGGGAK TPADRNEVVL GLSATNPPKI DRNFVSNFNV  180
GQNRGGRIHR AVSDYDYGGG RDYASPIPLG VRLRHRTADS LDPDYHGSRY PSKAIGGGNM  240
GSLGLRPKKH RRTDEMLDSD DDDSVESDEE MAFRPSSSFR PENGRAQAPV GRKINPFTEI  300
ASSIKMLGDE FVRMEKMKME MAREFEKTRM RFEMKRNEMI IKSEQMIISA VIEAVHENKK  360
VGKAVSPET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-26Trihelix family protein