PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86417.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 242aa    MW: 26781.5 Da    PI: 5.1956
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-1875124255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  OWM86417.1  75 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFQTAEMAARAHDVAALAIKG 124
                 69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEAAEVHNKC QAVHPTFSSS SSSWSAKSAS SSSEDWFESQ KGKSQETEEL CAIDRRSKKK  60
ARNCNGGEDG SKHPTYRGVR MRQWGKWVSE IREPRKKSRI WLGTFQTAEM AARAHDVAAL  120
AIKGRSAHLN FPELAPNLPR PAGPTPKDIQ AAAALAAAIN FPATILVTHP ESAETTTEKS  180
NSENSAAEED YGDPFTDLPD LLQDISNRIS GFGPSILPWQ VENDEEAGFH QEQDDPFYWD  240
CY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35700.18e-51ERF family protein