PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86420.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 213aa MW: 24453.2 Da PI: 9.4096

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.9	6.2e-20	29	76	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l ++++ +G+++Wkt+a++ g++R++k+c++rw++yl OWM86420.1 29 RGAWTAEEDRKLSQYIEIHGPRRWKTVASKSGLNRCGKSCRLRWLNYL 76 89********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	82	127	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l OWM86420.1 82 RGNISDEEEDLILRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 127 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MTAPTRRNKN SNNNGNEQGS SSSKKVMNRG AWTAEEDRKL SQYIEIHGPR RWKTVASKSG 60 LNRCGKSCRL RWLNYLRPNI KRGNISDEEE DLILRLHRLL GNRWSLIAGR LPGRTDNEIK 120 NYWNSHLSKK INQKEKSREV PAPQEATTPP LKTPENSQAE EEEGGNKLGT GNLDPSFDVN 180 EFFDFTTEGS YGLEWVNKFL ELDEDMLTAD KRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	7e-57	MYB family protein