PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86564.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 359aa MW: 40720.4 Da PI: 4.6764

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.7	4.4e-34	38	129	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k++e++ed+e++ ++sws+ nsfvv+d+++f+ +LpkyFkh+nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik OWM86564.1 38 FLVKTFEMVEDSETDPIVSWSAGRNSFVVWDSHKFSGLLLPKYFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEAFLGGQKHLLKNIK 125 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ OWM86564.1 126 RRRH 129 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MEGVTIKLEE DTVSNVVGSS DTQPRPIEGL HEAGPPPFLV KTFEMVEDSE TDPIVSWSAG 60 RNSFVVWDSH KFSGLLLPKY FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN EAFLGGQKHL 120 LKNIKRRRHV SHNPTQQGSQ GPCVELGQFG LESELEILKR DRNLLMSEIA KLRSHQQRSR 180 DQIAAVEQRL RNTERKQQQM LNFLARALNN PSFVQNLMRR GEVKGVEMRR KRRLTASPST 240 ENLQEVATLL AQEDQFEGVE SQMEAIFRSS SSDVSDPSWS SAGPPSNLES VNETTIWEEL 300 ITEDMLKGEA PDEEDVLAAV KEPEFDVEVE DLVVSDDSTG WNEHLSELMD QMGYLGSSP

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MEGVTIKLEE DTVSNVVGSS DTQPRPIEGL HEAGPPPFLV KTFEMVEDSE TDPIVSWSAG  60
RNSFVVWDSH KFSGLLLPKY FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN EAFLGGQKHL  120
LKNIKRRRHV SHNPTQQGSQ GPCVELGQFG LESELEILKR DRNLLMSEIA KLRSHQQRSR  180
DQIAAVEQRL RNTERKQQQM LNFLARALNN PSFVQNLMRR GEVKGVEMRR KRRLTASPST  240
ENLQEVATLL AQEDQFEGVE SQMEAIFRSS SSDVSDPSWS SAGPPSNLES VNETTIWEEL  300
ITEDMLKGEA PDEEDVLAAV KEPEFDVEVE DLVVSDDSTG WNEHLSELMD QMGYLGSSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-108	HSF family protein