PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86602.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 238aa    MW: 25708.8 Da    PI: 5.1314
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-1854103255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  OWM86602.1  54 VYRGVRMRN-WGKWVSEIREPKK---KSRIWLGTFPTPEMAARAHDVAALSIKG 103
                 59****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MIDPTSGFDP ETSSNSSSSS PLLSSPNRAS LETRNQPGDL KKAKRLRDSS KHLVYRGVRM  60
RNWGKWVSEI REPKKKSRIW LGTFPTPEMA ARAHDVAALS IKGGSAILNF PELAGSLPRP  120
ASLAPRDIQA AAAEAARMGH LNPSAGPLAK SSTSSTSVSI ATSDELGEII ELPSLEASYG  180
ELPEFVLIDS VDAWGYRGDI IDSPWGEEVC GFDDHQCGYI CDGLSCIQNG FEGLLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-56ERF family protein