PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86751.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 424aa MW: 46087.1 Da PI: 6.3991

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	1.9e-07	374	406	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + OWM86751.1 374 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 406 69*****************************87 PP
2	ELK	28.8	2.8e-10	327	348	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ OWM86751.1 327 ELKHELKQGYKEKIVDIREEIL 348 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MAFHNHQLTA QDLSSLHHFS DHPETPTSAS AADPHHPAPN WLNSALLRAQ QTPHSAAQFS 60 PSAPAPAPAD GSSNFLNLHT AAATGDSTPT HPHPHHQWLS RHQSLQGVPA PADSIVSGGG 120 AEHPSSDNTK SEGAAAGVES GGGGGAGAAA EGPVNWQNAR YKAEILGHPL YGQLLSAHVA 180 CLRIATPVDQ LPRIDAQLAQ SQQVVAKYSG LGGAGQGMVS DDEELDQFMT HYVLLLCSFK 240 EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEDDPVD SDTNLFDGSL 300 DGTDSLGFGP LIPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT 360 TSVLKSWWQT HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSTVMKS 420 KRKR

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MAFHNHQLTA QDLSSLHHFS DHPETPTSAS AADPHHPAPN WLNSALLRAQ QTPHSAAQFS  60
PSAPAPAPAD GSSNFLNLHT AAATGDSTPT HPHPHHQWLS RHQSLQGVPA PADSIVSGGG  120
AEHPSSDNTK SEGAAAGVES GGGGGAGAAA EGPVNWQNAR YKAEILGHPL YGQLLSAHVA  180
CLRIATPVDQ LPRIDAQLAQ SQQVVAKYSG LGGAGQGMVS DDEELDQFMT HYVLLLCSFK  240
EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEDDPVD SDTNLFDGSL  300
DGTDSLGFGP LIPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT  360
TSVLKSWWQT HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSTVMKS  420
KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	404	424	RKRNWHSNPSSSTVMKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-179	TALE family protein