PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86761.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 520aa    MW: 58008.5 Da    PI: 7.0219
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.42.5e-16184226245
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                 +rl+W++eLH +F++a+++L G+ekA+Pk+ilelm+ + +t+eh
  OWM86761.1 184 TRLNWSQELHFKFIKAIDHL-GIEKAVPKNILELMNDENITREH 226
                 79******************.*********************98 PP
2Response_reg70.95.3e-24141231109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEE.SSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillD.iempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                   vl vdD+ + ++ll+++l+k gy +v++++++  al+ll+ekd  ++l++ D ++mp+mdGl+ll+     e +lp+i+++a ++ + + + +  Ga
    OWM86761.1  14 VLAVDDNATCLKLLETLLQKCGY-DVTTTSKAVTALKLLREKDseFNLVISDvHNMPDMDGLKLLEFVGL-ELDLPVIMLSADDDHDVVMKGITHGA 108
                   799********************.***************999999*******779**********98844.347*********************** PP

                   SEEEESS--HHHHHH CS
  Response_reg  95 kdflsKpfdpeelvk 109
                    d+l+Kp+  ee+ +
    OWM86761.1 109 CDYLVKPVRLEEVKN 123
                   *********999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MDDTSAQFPV GMRVLAVDDN ATCLKLLETL LQKCGYDVTT TSKAVTALKL LREKDSEFNL  60
VISDVHNMPD MDGLKLLEFV GLELDLPVIM LSADDDHDVV MKGITHGACD YLVKPVRLEE  120
VKNIYQHVLR RKKLNQENLK KSQTDHITEP SCGKVRRKRK DENEMRDDNV QKQDVDPSRT  180
RKRTRLNWSQ ELHFKFIKAI DHLGIEKAVP KNILELMNDE NITREHKYRL SLKKARNLAN  240
EKVKAALQAS ANSSYAQTGL LSGTGTAHLQ SLGGPRNLRG VALRPFTSSS VLAQSNNNQI  300
SYAQGLNNPM FGQGVHNSAN FSIPYRPHDL GTSFGGLYFQ PCITRNQAWS CQSPIRGVCN  360
EVWSSAAQLT QNLPNPFPLI DFSNQASSSV LYNLQEDSLT FPLPAGGDLR KTHCQATQTN  420
KISQGTLDFI EQPRAEFLLL PPPETDEVQR SVSESDTEPK EHVNYLEKLQ ETNFLASKSP  480
SHGSLEDLVN SILKSEQETT QSGLTRNSGL KSILTPAVDT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130160RRKKLNQENLKKSQTDHITEPSCGKVRRKRK
2156161RRKRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.19e-84ARR-B family protein