PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86950.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 246aa    MW: 27751.1 Da    PI: 5.0549
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.5e-135395754
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                  Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L
  OWM86950.1 53 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIDYIQEL 95
                57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDNGEEFQHY WETNRFYQTD ELDIWVDEAI SGYYDSSSPD GAASSSAASK NIVSERNRRK  60
KLNERLFALR AVVPNISKMD KASIIKDAID YIQELHEQER RIQSEIMDLE GGGNRNCSNN  120
TGGLGGDVYG VDFDHDLPLY LRSKKKRTDQ LGYDSGGGSR ISPIEDLELR VTYMGERTVV  180
VSLTCSKRTD TMVKLCEVFE SLKLKIITAN ITAFSGRLSK TVFIEVSSLH FTSLRFDSDS  240
ILFLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.28e-72bHLH family protein