PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87195.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 123aa    MW: 13290 Da    PI: 10.1482
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.6e-0581103123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C+k Fs+   L  H  +H
  OWM87195.1  81 FTCKYCKKKFSSYLALAGHVISH 103
                 89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MEGGQIELEN LLLKLQVNTQ SDWPVAYAAQ VATGTSGDVP VAVLKLQVTV DPKRQQQQNG  60
SGAEEVSTVS SQSSAPTQRL FTCKYCKKKF SSYLALAGHV ISHKQERALG GNARGRAHSR  120
GRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.13e-09C2H2 family protein