PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87218.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YB
Protein Properties Length: 157aa    MW: 17691.8 Da    PI: 5.326
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87218.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB141.22.7e-4416110397
       NF-YB   3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 eqdr lPianv+rim+++lP  akisk ake++qecv+ef+ fvt+easd+c +ekrkt+ngdd++wala+l f dy   lk+yl++yr +ege+
  OWM87218.1  16 EQDRQLPIANVGRIMRRALPPSAKISKGAKESMQECVTEFVNFVTGEASDHCLQEKRKTMNGDDICWALASLSFYDYCPLLKTYLERYRYVEGER 110
                 8*******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MAHENSNEAA AITPPEQDRQ LPIANVGRIM RRALPPSAKI SKGAKESMQE CVTEFVNFVT  60
GEASDHCLQE KRKTMNGDDI CWALASLSFY DYCPLLKTYL ERYRYVEGER ATRARASYNN  120
NNDLITSEEA SKNTDEIDIV SPKYDFFAKV NGSGLNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-48NF-YB family protein