PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM87240.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 432aa MW: 47345.2 Da PI: 5.7079

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM87240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.6	2.5e-09	244	291	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OWM87240.1 244 SHSLAERVRREKISERMKFLQDLVPGC----HKITGKAGMLDEIINYVQSLQ 291 8***********************9....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MKMVLPDTIH CVNSPEMTVL ERQRTSLLKW QQDQGAALFQ QQTQSFYGVG GGVSSCFSPG 60 SESFMGLGEV VNQCNMIDPA SGIEYWGQQG KVEVPAIGFG GGVAPSGYEV SCGSISGTAS 120 CPTTVVMAAS GAQAMAAALA EEKIGAPVGK ERFNKRKLER AHSTKGCEDD ARDKKIKGCS 180 DELESKITEQ SNNNSNGNKK DARNGNDNNK ETSVSSSKDN SKASEVQKPD YIHVRARRGQ 240 ATDSHSLAER VRREKISERM KFLQDLVPGC HKITGKAGML DEIINYVQSL QRQVEFLSMK 300 LAAVNPRLDF DINSLFQKEV NQMIPTCTSS FPTMDMSPEL TNPAYLHFDP MQQVVSCSTL 360 DMGIINPDMG IRRTSGPVPV PDPFIDSSCF PQIQPGPTWD TDFQNLYNME FQQGRATATT 420 TYQSHQQYNM GD

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MKMVLPDTIH CVNSPEMTVL ERQRTSLLKW QQDQGAALFQ QQTQSFYGVG GGVSSCFSPG  60
SESFMGLGEV VNQCNMIDPA SGIEYWGQQG KVEVPAIGFG GGVAPSGYEV SCGSISGTAS  120
CPTTVVMAAS GAQAMAAALA EEKIGAPVGK ERFNKRKLER AHSTKGCEDD ARDKKIKGCS  180
DELESKITEQ SNNNSNGNKK DARNGNDNNK ETSVSSSKDN SKASEVQKPD YIHVRARRGQ  240
ATDSHSLAER VRREKISERM KFLQDLVPGC HKITGKAGML DEIINYVQSL QRQVEFLSMK  300
LAAVNPRLDF DINSLFQKEV NQMIPTCTSS FPTMDMSPEL TNPAYLHFDP MQQVVSCSTL  360
DMGIINPDMG IRRTSGPVPV PDPFIDSSCF PQIQPGPTWD TDFQNLYNME FQQGRATATT  420
TYQSHQQYNM GD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	4e-64	bHLH family protein