PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87336.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 205aa    MW: 22898.5 Da    PI: 7.2512
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.41.4e-283191259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                +Dg++W+KYGqKe+ gs +prsYYrCt++   +Cp+kk+v+r ++dp+++++tY+g+H+++
  OWM87336.1 31 EDGFTWKKYGQKEILGSLYPRSYYRCTHQklyHCPAKKQVQRLDSDPDTFQVTYRGNHTCH 91
                7****************************9999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MARHLYRQDD PSRRTVTVEA PRFGNTEIPP EDGFTWKKYG QKEILGSLYP RSYYRCTHQK  60
LYHCPAKKQV QRLDSDPDTF QVTYRGNHTC HMSLTAPSIS PPQPSTLGMV ISQPLPLPQP  120
SLGQPSGTHS QWLSMDFSLG SGAGPSSAPA APREDQYPLV AVMADVMFNS SGSSSNSMDT  180
IFSSIDHRDD HDQRRQSWEA GDKKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-45WRKY family protein