PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM87401.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 352aa MW: 39315.6 Da PI: 9.9027

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM87401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.5e-32	87	140	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ OWM87401.1 87 PRLRWTPDLHLCFVRAVERLGGHDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 140 8****************************************************7 PP
2	Myb_DNA-binding	51.8	1.8e-16	88	139	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg+ t+k++ + m+ kg++ ++ks++q+y+ OWM87401.1 88 RLRWTPDLHLCFVRAVERLGGHdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 139 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MKGSESTANN FFSDSRSPSS AERPEDLRHE EVDQIGGESD EKRTNNGRSS SSSTVEENNN 60 NNNGEKTKAA SSSGSGAVRK YIRSKMPRLR WTPDLHLCFV RAVERLGGHD RATPKLVLQL 120 MNIKGLSIAH VKSHLQMYRS KKIDDHNQAM KDHGLLIEGS DHHIYNLSQL SMLQSLNERA 180 SSRYGNASWK GHNHHHQVYS PNYHMINNGS GLAGNYNARL MINNDIQYAG NSPFSRPDLS 240 IRDQIRFPSS ASSPSLLSLR VVPKEVQKRK NPESNGSTLD LDLSLGMKSK SDQVNRKDNG 300 DDGATESNLS LSLNSLSNNT LSDKITRFKE KEKEESEIIR TKKKTNTLDL TL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MKGSESTANN FFSDSRSPSS AERPEDLRHE EVDQIGGESD EKRTNNGRSS SSSTVEENNN  60
NNNGEKTKAA SSSGSGAVRK YIRSKMPRLR WTPDLHLCFV RAVERLGGHD RATPKLVLQL  120
MNIKGLSIAH VKSHLQMYRS KKIDDHNQAM KDHGLLIEGS DHHIYNLSQL SMLQSLNERA  180
SSRYGNASWK GHNHHHQVYS PNYHMINNGS GLAGNYNARL MINNDIQYAG NSPFSRPDLS  240
IRDQIRFPSS ASSPSLLSLR VVPKEVQKRK NPESNGSTLD LDLSLGMKSK SDQVNRKDNG  300
DDGATESNLS LSLNSLSNNT LSDKITRFKE KEKEESEIIR TKKKTNTLDL TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-40	G2-like family protein