PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87478.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 828aa    MW: 93418.8 Da    PI: 8.7793
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.61e-1134548251374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ cA+av+ +d++ a++lL++++++as +gd mqR+a y++ +L+arla+s++++ +al  ++ts    +++l+a++lf+ ++P+ k+s++  N
  OWM87478.1 454 LRTLLTFCAQAVAVDDKTSASELLKKIRQHASLTGDGMQRVAYYMADGLEARLAGSGTQIHRALMYKPTS---AVDTLKAYQLFQTACPFKKLSNFFSN 549
                 5789*****************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I++ +e+++++Hii f+i++G+QWp+L+q+L++Rp+gppslRiTg++ p++g   +e++e tg+ L+++Ae+++vpf+f++ va+++e++ +++L +
  OWM87478.1 550 RTIMNVAERASKLHIIEFGIGYGFQWPCLIQSLSTRPGGPPSLRITGIDLPQPGfrPAEKIEGTGNHLKNYAEKFKVPFQFKA-VAQKWEAICVKDLGL 647
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E+l+Vn++++l++llde+v +es+rd+vL+l+k+++P+v++    +a h+++ F  rf eal ++s+ fd+l++++pr+  er  +Ere++gr+++
  OWM87478.1 648 EEDEVLVVNCMYRLKNLLDETVVVESPRDRVLSLIKQMNPDVFIQGVVNAAHSAPLFILRFREALFHFSTQFDMLDMNVPRNVPERGLIEREIFGRQAM 746
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nvvaceg er+ r et+++W+ r  +aGF+ +pl+++++ +ak  ++ ++ + + +ee+s++l++gWk+r ++++S W+
  OWM87478.1 747 NVVACEGPERVDRPETYKQWQLRNLRAGFRLLPLDSEIVRKAKDRVKAHYHKDFVIEEDSNWLLQGWKGRLIYALSTWK 825
                 **************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 828 aa     Download sequence    
MVYYWAVDWW HCSSPSLIMG LRPIRSPLMG LQSLMGPCLF APQGNNSNVP RHSHSIIFMG  60
TSDLTTFKRW PQCFIQRRAL SEKVNQIAEL KLKLSFHSPV EPRAFLLRKA PLLSVVSVAE  120
LWRALLYWLL PQKRSPFVCR VWSIEMFIIM DQSLGAFTGS INGHRENDEL AFVLSGEDLR  180
ARLKIDDALQ SRNPNLAMFT SPNSGVSCER ESVVHQDCDF SDVVFQYISQ MLMEEDIGEK  240
TCMRHESSAL EATEKSLYEA IGETYPPRDY RPIPHISSGS ISESPNKSCV FSSRSDSSGL  300
GSSVSSNPDW KSNIELHERF VPAIASPSVE SSARSFEVFD KNGSAGRIKD GFTALARTFP  360
SNNASVDVSR GKRNPYSEQT SLEKEQEGRT NKQSAVYVEP EVTSEMLDMV LLNGAKGESA  420
LRQAWQNGQM KGSDGSNSRG RGKKKGRKRE VIDLRTLLTF CAQAVAVDDK TSASELLKKI  480
RQHASLTGDG MQRVAYYMAD GLEARLAGSG TQIHRALMYK PTSAVDTLKA YQLFQTACPF  540
KKLSNFFSNR TIMNVAERAS KLHIIEFGIG YGFQWPCLIQ SLSTRPGGPP SLRITGIDLP  600
QPGFRPAEKI EGTGNHLKNY AEKFKVPFQF KAVAQKWEAI CVKDLGLEED EVLVVNCMYR  660
LKNLLDETVV VESPRDRVLS LIKQMNPDVF IQGVVNAAHS APLFILRFRE ALFHFSTQFD  720
MLDMNVPRNV PERGLIEREI FGRQAMNVVA CEGPERVDRP ETYKQWQLRN LRAGFRLLPL  780
DSEIVRKAKD RVKAHYHKDF VIEEDSNWLL QGWKGRLIYA LSTWKPEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-175GRAS family protein