PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87616.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 376aa    MW: 40125.6 Da    PI: 7.2381
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-182777256
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  OWM87616.1 27 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDEAARTLRGA 77
                689******.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MAFQQKAANE SSLRSGRRKS SARGHHRFVG VRQRPSGRWV AEIKDSLQKV RLWLGTFDTA  60
EDAARAYDEA ARTLRGANAR TNFELPQPAP RNGLDIDNLL PFSFDAACGS VNEKEGLRGA  120
LRAKLFDKVS LPIVPPVAVT GLKPAARAGD SSPVQKSSKT DTLTGSAAGV SRSASAQQQG  180
RHSTSNKESR DQSHAGRGQD RMDCGLVDNS EMPQWHSPSQ VSPIAVTCGS WPGVQCPEPS  240
TASEMCREYL MTTPAAATHW ETEMSHALES GLFEPVAFTT SSSWPVSGVV AGNNGGSTAS  300
LEGAYLDNCS GELTVVSRNW PKTMTNDSTG MTTPMSQSGV VMEAAWSSEQ PLLHYDGGGC  360
SVPGGSWDLH AFSVLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-18ERF family protein