PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM87619.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 553aa MW: 61524.4 Da PI: 4.3573

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM87619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.6	1e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yLk+k++gk+ + + i+evd+yk+ePwdLp k ++k+++ ewyfFs dkky +g+++nrat++gyWk+tgkd+++ + ++ OWM87619.1 9 LAPGFRFHPTDEELVRYYLKRKISGKPPRY-DPISEVDVYKCEPWDLPdKsRLKTRDLEWYFFSVLDKKYGNGSKTNRATENGYWKTTGKDRPIRQ-SS 105 579**********************998.99**********95347777888*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kktLv+++grap+g++++Wvmheyr+ OWM87619.1 106 RIVGMKKTLVYHSGRAPRGQRSNWVMHEYRM 136 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MARGSGTSLA PGFRFHPTDE ELVRYYLKRK ISGKPPRYDP ISEVDVYKCE PWDLPDKSRL 60 KTRDLEWYFF SVLDKKYGNG SKTNRATENG YWKTTGKDRP IRQSSRIVGM KKTLVYHSGR 120 APRGQRSNWV MHEYRMTDEE LEKAGIAQDA FVLCRIFQKS GPGPKNGEQY GAPFIEEEWE 180 EDTVALFPEQ QAMVDEVVAE EDANVEIDEV DQNVTVAIAP GRDPLPGNFC YGSSSNDNQN 240 SEENKEPYQT LPEDVGESQC EEQQPDENKF FILAGGYEMD VKPVKREFAP QPTDNMNLGD 300 NSSYPDGPFM DAADNPLPGD ELYLNDLSYS VEFPEGFNVE DYLTFSDTDE GNLMTHNSSQ 360 LMMTTDGSVS GEPLQSLEDV CDEIEQMSGT NLNASVSHEN EASSSKQNSE PEDLKPDFKH 420 TFLKQASHML GSFPAPPAFA SEYPIKDAAL RLNSAAHASS SVHVTAGMIR IRSLTLSSSG 480 IEWSVGKNGE LNIVLSFGIS QDDVTVSPAS AITPGLLSSK MPSLVSWSWV VFLVFWIFVL 540 SVSVKVGMLV CSR

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MARGSGTSLA PGFRFHPTDE ELVRYYLKRK ISGKPPRYDP ISEVDVYKCE PWDLPDKSRL  60
KTRDLEWYFF SVLDKKYGNG SKTNRATENG YWKTTGKDRP IRQSSRIVGM KKTLVYHSGR  120
APRGQRSNWV MHEYRMTDEE LEKAGIAQDA FVLCRIFQKS GPGPKNGEQY GAPFIEEEWE  180
EDTVALFPEQ QAMVDEVVAE EDANVEIDEV DQNVTVAIAP GRDPLPGNFC YGSSSNDNQN  240
SEENKEPYQT LPEDVGESQC EEQQPDENKF FILAGGYEMD VKPVKREFAP QPTDNMNLGD  300
NSSYPDGPFM DAADNPLPGD ELYLNDLSYS VEFPEGFNVE DYLTFSDTDE GNLMTHNSSQ  360
LMMTTDGSVS GEPLQSLEDV CDEIEQMSGT NLNASVSHEN EASSSKQNSE PEDLKPDFKH  420
TFLKQASHML GSFPAPPAFA SEYPIKDAAL RLNSAAHASS SVHVTAGMIR IRSLTLSSSG  480
IEWSVGKNGE LNIVLSFGIS QDDVTVSPAS AITPGLLSSK MPSLVSWSWV VFLVFWIFVL  540
SVSVKVGMLV CSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-147	NAC family protein