PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87763.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 301aa    MW: 33648.8 Da    PI: 5.9579
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.4e-1189141155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +h+ +E++RR+++   +  Lr+ lP       ++K s a+   +Av+Y+k+Lq
  OWM87763.1  89 KKISHSDIEKQRRKEMAALYGSLRSQLPLeY---LKGKRSAADQMHEAVKYVKHLQ 141
                 6789*************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDDAADPKLP YIQTDELFQF PPALWYTYSQ QPPPPLYHHP LISTSPPNEY RHGIALAAND  60
QLSNSTQPGI IFHDNYNHGS DNQTGDKKKK ISHSDIEKQR RKEMAALYGS LRSQLPLEYL  120
KGKRSAADQM HEAVKYVKHL QKKIKELKAK RDELKRRSCP SDDQSNSPII HECATGPVQE  180
DAVMVSLYRS GEVEVAVNTC VDQGLPLGRV LEILIEEGLS INGCNSTRVN ERLLHFIQCE  240
FRYPEQTVLV GSPLGLTSLV DLCEPELARA DADVDSRWVD DGGGVSTERV QHSSLSWSSS  300
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-35bHLH family protein