PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87821.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 344aa    MW: 38421 Da    PI: 4.6296
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-08283335346
                      SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 
                      +WT+eE ++l+++v+++ +      tWk I +         Rt+ ++k++w +
       OWM87821.1 283 PWTEEEVKILKECVEKFRNAddktiTWKQILEFGAgvfmHDRTARDLKNKWTN 335
                      8*****************99**********9965468888***********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MMAPPEGADL PESSLPWLWV IEYLASSERA NAKLLYGIIE SAPLSRDELG KNVRELVALA  60
CLEQLCGPEK EKETMCCDPS NSDSGSGSIF ELSWSCEDVL EDILEEGSFS DLRMTGKEQL  120
KAQVCRFVMH KRNSMPKPAL EQLRDTILEG MHPDAASLKL MSGLACSSDS HRVLGGNVEH  180
GDGRRDNDSC MGPNNTGNLD GRINDVGDQR EVLPSDANEP VHCPGCSLQI DGEDSPEDDF  240
EDADGTDDDE SNISNHTISL RRRTIWRVGT SPVVSCRRQK KAPWTEEEVK ILKECVEKFR  300
NADDKTITWK QILEFGAGVF MHDRTARDLK NKWTNISGRY RKFK