PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88093.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARR-B

Protein Properties

Length: 514aa MW: 58623.6 Da PI: 5.5696

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.9	1.2e-24	213	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl W + LH+ Fv+av +L G ++A+Pk+ile+m+v+gLt+e+v+SHLQkYR OWM88093.1 213 KQRLIWHKPLHALFVSAVLKL-GVDEAVPKKILEMMNVPGLTRENVASHLQKYRQ 266 79*****************.9*****************************6 PP
2	Myb_DNA-binding	31.3	4.9e-10	215	265	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ W + ++ l+v av +lG + +k+I ++m+ g+t++++ s++qky+ OWM88093.1 215 RLIWHKPLHALFVSAVLKLGVDeaVPKKILEMMNvPGLTRENVASHLQKYR 265 5679999*******************************************7 PP
3	Response_reg	38.5	6.3e-14	38	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+ dD++ +++l ++le+ +y ev ++++ +a e+lk+++ +Dl+l+ + +g+d ++ll+ i e ++p+i+++ ee+ +++ ++ + OWM88093.1 38 LLVLDDDQEHLRVLGKMLEECQY-EVISCTQVGSAFEKLKQNKdrFDLLLTNAMVSGVDIFKLLRDISGEL-DIPVIIMS---EEDRTTADVENDFC 129 4788*****************.555555555566666555449******************8865.8***...445577777999 PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +l+Kp+++e l++ OWM88093.1 130 NYLVKPIKKEVLRD 143 ********999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MNDVDKGTLI SEAGPESVSD SVGTRYDDLP SDFMILRLLV LDDDQEHLRV LGKMLEECQY 60 EVISCTQVGS AFEKLKQNKD RFDLLLTNAM VSGVDIFKLL RDISGELDIP VIIMSEEDRT 120 TADVENDFCN YLVKPIKKEV LRDIWQHVVR KRKCTFKDLV RVRNPENRNR QQENYDDTHC 180 GGNLKSPKNL KRENNSGDNN IHEQRDVIPP MKKQRLIWHK PLHALFVSAV LKLGVDEAVP 240 KKILEMMNVP GLTRENVASH LQKYRQRQKK ETQDCLEKTI FGCLSSPSNP DIHGLINHEN 300 WKMDIAEWLQ MQEMMNQKGW SQSLHTIQNM NTHVQIAPPY QEIESMMSGY AGNPIFSDGL 360 AEADFPNGGG TIEMGRAKAY NPILRTPAGF DFSISSHMQY QFKGLPLVND FYHDFSQIAP 420 QDWELSFQHE NIIPDQLHEN IIPGAVTILD TQGNLPFGDN AVKIKSEIFP GTSVHPMIPA 480 HFGLRGLMMA QLPDQINQHS TSMYEYELGF NGFQ

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MNDVDKGTLI SEAGPESVSD SVGTRYDDLP SDFMILRLLV LDDDQEHLRV LGKMLEECQY  60
EVISCTQVGS AFEKLKQNKD RFDLLLTNAM VSGVDIFKLL RDISGELDIP VIIMSEEDRT  120
TADVENDFCN YLVKPIKKEV LRDIWQHVVR KRKCTFKDLV RVRNPENRNR QQENYDDTHC  180
GGNLKSPKNL KRENNSGDNN IHEQRDVIPP MKKQRLIWHK PLHALFVSAV LKLGVDEAVP  240
KKILEMMNVP GLTRENVASH LQKYRQRQKK ETQDCLEKTI FGCLSSPSNP DIHGLINHEN  300
WKMDIAEWLQ MQEMMNQKGW SQSLHTIQNM NTHVQIAPPY QEIESMMSGY AGNPIFSDGL  360
AEADFPNGGG TIEMGRAKAY NPILRTPAGF DFSISSHMQY QFKGLPLVND FYHDFSQIAP  420
QDWELSFQHE NIIPDQLHEN IIPGAVTILD TQGNLPFGDN AVKIKSEIFP GTSVHPMIPA  480
HFGLRGLMMA QLPDQINQHS TSMYEYELGF NGFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	4e-52	ARR-B family protein